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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40259963_40260079_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40259963 - 40260079

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CGCTTCGTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAG

U12 Branch Point Sequence:

GCTTCGTTACAG

Flanking Amino Acid:

KRMISLRDQRINEKERAKAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.3

32.2

Major BPS

39.5

-0.6

1.5

43.7

39.4

Major PPT

74.9

0.56

0.9

67.7

37.8

Minor 5ss

30.9

-2.2

3.2

40.5

38.7

Minor BPS

44.9

-0.5

2.4

52.97

47.4

Associated Gene:

Gene:

FCF1

Ensembl Gene ID:

ENSAPLG00000002613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002648

40259800 - 40263062

3263