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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40260394_40260653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40260394 - 40260653

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

TTTTTGCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTGCATT

Flanking Amino Acid:

QSMMDCLYAKCIPCITDCVM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

59.6

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.6

0.67

0.9

78.6

Minor 5ss

29.6

-2.3

3.2

35.3

41.4

Minor BPS

54.5

0.22

1.9

79.72

Associated Gene:

Gene:

FCF1

Ensembl Gene ID:

ENSAPLG00000002613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002648

40259800 - 40263062

3263