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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40276069_40279061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40276069 - 40279061

Intron Length:

2993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTCATTTGAATA

Flanking Amino Acid:

SARFEGPRGPRFDGPRGRGY

Intron Amino Acid Position:

781

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

74.7

0.56

70.2

39.7

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

54.9

0.15

1.4

63.98

36.9

Associated Gene:

Gene:

YLPM1

Ensembl Gene ID:

ENSAPLG00000002844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031518

40267176 - 40304438

37263

ENSAPLT00000002898

40267176 - 40304438

37263