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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40289367_40289663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40289367 - 40289663

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGAATTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCACTGAACT

Flanking Amino Acid:

AYDHGPSMFGGDRRNYPEER

Intron Amino Acid Position:

1842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

65.3

0.35

1.1

64.3

40.5

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

68.7

0.67

1.6

88.18

35.9

Associated Gene:

Gene:

YLPM1

Ensembl Gene ID:

ENSAPLG00000002844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002898

40267176 - 40304438

37263

ENSAPLT00000031518

40267176 - 40304438

37263