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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40289819_40290415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40289819 - 40290415

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

ATCTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTACATTATCT

Flanking Amino Acid:

PPGRDSRPERIVIIMRGLPG

Intron Amino Acid Position:

1894

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

71.6

40.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

0.74

0.9

80.7

36.3

Minor 5ss

35.2

-1.7

2.8

40.2

Minor BPS

63.6

0.5

1.9

86.38

39.1

Associated Gene:

Gene:

YLPM1

Ensembl Gene ID:

ENSAPLG00000002844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031518

40267176 - 40304438

37263

ENSAPLT00000002898

40267176 - 40304438

37263