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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40319981_40320055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40319981 - 40320055

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

GCCCCGGTACCC

Flanking Amino Acid:

THYNKGNDFQVPGRFLEVAS

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

74.9

0.56

0.8

31.5

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

36.1

-1

2.5

43.75

44.2

Associated Gene:

Gene:

PROX2

Ensembl Gene ID:

ENSAPLG00000024082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044496

40319795 - 40322710

2916