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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40320251_40320349_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40320251 - 40320349

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTGGG

5'SS Class:

major

3'SS Sequence:

TTACCCCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAC

U12 Branch Point Sequence:

TTCCCCTTTACC

Flanking Amino Acid:

LLRSYFLDVQFSRCITSQLI

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.2

47.1

Major BPS

61.7

0.29

1.1

40.4

Major PPT

67.2

0.39

62.7

34.2

Minor 5ss

36.2

-1.6

3.4

49.2

47.1

Minor BPS

68.5

0.57

1.6

76.59

39.5

Associated Gene:

Gene:

PROX2

Ensembl Gene ID:

ENSAPLG00000024082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044496

40319795 - 40322710

2916