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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40338241_40339111_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40338241 - 40339111

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCCTCTTCT

5'SS Class:

weak_major

3'SS Sequence:

GTTCACTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CTCTGCTTACTT

Flanking Amino Acid:

ETTAAFSSCQVKMNRMRQRI

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.5

0.06

1.3

55.6

43.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.7

0.9

77.2

36.7

Minor 5ss

41.3

-1

3.8

59.3

39.4

Minor BPS

51.5

0.13

2.1

70.75

46.9

Associated Gene:

Gene:

DLST

Ensembl Gene ID:

ENSAPLG00000009194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009640

40333464 - 40343536

10073