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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40361777_40361887_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
40361777 - 40361887

Intron Length:
111

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGCGGC

5'SS Class:
major

3'SS Sequence:
TGGCCTCTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGGTGAC

U12 Branch Point Sequence:
GTGGCGGTGACG

Flanking Amino Acid:
IIAHGHWGSAGELMELIRAE

Intron Amino Acid Position:
52

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1
57.9
41.8

Major BPS
47.5
-0.1
1.3
38.2
41.7

Major PPT
76
0.58
0.9
69.4
36.8

Minor 5ss
31.7
-2.1
3.3
41.6
45.3

Minor BPS
39.3
-0.9
2.6
46.53
46.7

Associated Gene:

Gene:
EIF2B2

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

40361576 - 40366138
4563