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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40367642_40368240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40367642 - 40368240

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTGT

5'SS Class:

major

3'SS Sequence:

TTTTTCCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTGCTTAATA

Flanking Amino Acid:

DIDHLQQEIQPKPNLARLRK

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.4

43.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

89.7

0.89

0.6

82.1

29.9

Minor 5ss

37.5

-1.4

3.5

56.6

47.6

Minor BPS

72.4

0.7

1.7

80.47

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010682

40367555 - 40379685

12131