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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40368393_40369329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40368393 - 40369329

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGGGAA

5'SS Class:

major

3'SS Sequence:

TCTCTTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TTTCTCTTATTC

Flanking Amino Acid:

LKVLASQACHGAIKFNDSLT

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

61.9

38.5

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

85.1

0.79

0.8

77.3

35.6

Minor 5ss

27.3

-2.6

3.7

33.4

44.6

Minor BPS

65.1

0.45

1.5

75.25

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010682

40367555 - 40379685

12131