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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40369630_40370877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40369630 - 40370877

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

AGCAACTGATCA

Flanking Amino Acid:

RQPVTESIVEEFIQEQVELV

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

30.2

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

37.3

-1.4

2.8

49.7

46.6

Minor BPS

43.1

-0.5

1.8

49.67

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010682

40367555 - 40379685

12131