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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40375301_40375944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40375301 - 40375944

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

GTTACATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTTTTAATC

Flanking Amino Acid:

NTRNEMDKKEGGNLVVLVDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

84.3

26.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.1

0.54

0.9

70.6

Minor 5ss

-1.8

3.5

46.9

48.4

Minor BPS

68.9

0.57

1.2

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010682

40367555 - 40379685

12131