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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40378902_40379573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40378902 - 40379573

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCCA

5'SS Class:

major

3'SS Sequence:

TGTTCTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TTATCTGTATGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

63.2

42.9

Major BPS

0.42

1.3

60.1

46.3

Major PPT

83.9

0.76

0.8

76.7

37.4

Minor 5ss

29.6

-2.3

3.4

39.1

46.2

Minor BPS

46.4

-0.1

2.4

72.07

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010682

40367555 - 40379685

12131