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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40399467_40399827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40399467 - 40399827

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

AGTCCCAGAGCT

Flanking Amino Acid:

FCRGTEGMQQVEVHSKGTQT

Intron Amino Acid Position:

935

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.6

33.8

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

76.1

0.59

72.9

42.2

Minor 5ss

28.1

-2.5

34.6

41.4

Minor BPS

46.5

-0.1

1.9

67.59

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038