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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40400041_40400664_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40400041 - 40400664

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATGTTT

5'SS Class:

major

3'SS Sequence:

CTTGTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCAAA

U12 Branch Point Sequence:

CCAGCCTGACTT

Flanking Amino Acid:

GFNKPKTEHWPPCLSPAVPC

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

72.3

39.7

Major BPS

50.1

1.3

58.9

35.8

Major PPT

78.5

0.64

0.8

73.1

31.8

Minor 5ss

42.3

-0.9

3.4

56.3

47.9

Minor BPS

45.7

-0.2

1.8

56.84

46.1

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038