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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40400830_40401052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40400830 - 40401052

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTGG

5'SS Class:

major

3'SS Sequence:

TTGGTGTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

ACATACCTAACA

Flanking Amino Acid:

SSSCPGWLRKELENAEFIPM

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

63.2

43.6

Major BPS

63.2

0.33

63.6

30.5

Major PPT

70.1

0.45

1.1

61.5

48.6

Minor 5ss

36.2

-1.6

3.2

47.4

Minor BPS

53.3

0.1

1.9

64.82

40.8

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038