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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40401244_40401788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40401244 - 40401788

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAA

U12 Branch Point Sequence:

AAAGTGTAAAGT

Flanking Amino Acid:

SNSSGLSIGTVTQSCTTGGG

Intron Amino Acid Position:

745

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.8

79.3

28.9

Major BPS

57.5

0.19

1.4

61.7

43.1

Major PPT

71.3

0.48

65.8

45.3

Minor 5ss

30.7

-2.2

2.6

33.5

35.6

Minor BPS

37.8

-0.8

2.3

51.2

43.3

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038