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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40401849_40402081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40401849 - 40402081

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

GGCTCTCTAACT

Flanking Amino Acid:

CRGWHTIIVVEKVLNSKTIR

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

0.45

57.8

Major PPT

80.6

0.69

0.8

31.1

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

60.4

0.41

1.7

74.23

42.3

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038