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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40402807_40403384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40402807 - 40403384

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCCAC

5'SS Class:

major

3'SS Sequence:

TTCCTCCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CTCGCTGTGACT

Flanking Amino Acid:

PGKTHTASIDERGRLLTFGS

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

61.1

39.6

Major BPS

0.22

1.2

52.4

43.3

Major PPT

82.4

0.73

0.7

80.6

24.7

Minor 5ss

32.9

-2

38.7

40.9

Minor BPS

47.4

-0.1

2.1

65.84

45.8

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038