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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40405468_40406047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40405468 - 40406047

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGTGTGCTGACT

Flanking Amino Acid:

CGDDFTVCITDEGQVYAFGS

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

79.6

0.67

0.8

73.8

31.3

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

44.2

-0.3

2.4

67.94

43.1

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038