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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40410435_40411342_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40410435 - 40411342

Intron Length:

908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TTGTTTTGCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTGTTTTGCCT

Flanking Amino Acid:

LTLKRTFDATNPLNLCVKIV

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

45.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

74.4

0.55

0.9

69.4

41.7

Minor 5ss

40.7

-1

3.1

60.3

43.9

Minor BPS

44.4

-0.3

3.5

77.64

39.7

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038