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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40420051_40420615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40420051 - 40420615

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTGTTTTTAATT

Flanking Amino Acid:

SQRTWGHLIQDDSLVVWKEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.7

44.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

43.4

-0.7

2.9

58.6

45.9

Minor BPS

72.2

0.78

1.1

79.65

37.1

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038