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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40420646_40420831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40420646 - 40420831

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCCGG

5'SS Class:

major

3'SS Sequence:

CGTTTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

GTTTTCTTCCAG

Flanking Amino Acid:

GEATLYRRTESQRTWGHLIQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

54.5

49.7

Major BPS

57.1

0.18

1.1

Major PPT

85.2

0.79

0.8

76.9

37.3

Minor 5ss

35.9

-1.6

3.3

47.2

48.2

Minor BPS

38.4

-1

3.6

56.62

44.8

Associated Gene:

Gene:

NEK9

Ensembl Gene ID:

ENSAPLG00000010802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011286

40399344 - 40421381

22038