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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40427279_40427722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40427279 - 40427722

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAG

U12 Branch Point Sequence:

GATGTCAGACTA

Flanking Amino Acid:

KREEEMRDTNESTNTRVLYF

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

32.5

Major BPS

52.1

0.05

1.6

63.1

44.4

Major PPT

87.1

0.83

0.7

85.1

29.7

Minor 5ss

30.9

-2.2

3.4

38.5

41.1

Minor BPS

39.5

-0.8

1.8

46.55

36.9

Associated Gene:

Gene:

TMED10

Ensembl Gene ID:

ENSAPLG00000020865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018334

40426898 - 40439671

12774