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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40436344_40439410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40436344 - 40439410

Intron Length:

3067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACGGCA

5'SS Class:

major

3'SS Sequence:

CTCTCTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TGCTCCTTACCC

Flanking Amino Acid:

SSSGPSANLKITDSAGHILY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.2

62.8

37.7

Major BPS

72.7

0.56

30.1

Major PPT

73.6

0.53

0.8

68.4

30.9

Minor 5ss

29.6

-2.3

3.4

38.8

46.5

Minor BPS

69.3

0.59

1.6

75.07

41.7

Associated Gene:

Gene:

TMED10

Ensembl Gene ID:

ENSAPLG00000020865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018334

40426898 - 40439671

12774