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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40463367_40463497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40463367 - 40463497

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTGCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CCCTGGCTGACA

Flanking Amino Acid:

RRELTDTLQAETDQLEEEKS

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

73.2

0.52

0.9

65.6

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

37.8

-0.9

2.5

46.16

43.9

Associated Gene:

Gene:

FOS

Ensembl Gene ID:

ENSAPLG00000020281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040172

40462152 - 40464106

1955