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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40511814_40512384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40511814 - 40512384

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

TCTGCCCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTGAA

U12 Branch Point Sequence:

TCGCATGCAGCT

Flanking Amino Acid:

KKERTEFLQRESERLELMNA

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

62.7

37.5

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

0.38

66.2

35.8

Minor 5ss

26.7

-2.7

3.2

26.6

36.8

Minor BPS

35.5

-1

2.2

50.19

43.7

Associated Gene:

Gene:

JDP2

Ensembl Gene ID:

ENSAPLG00000011380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011840

40508992 - 40512570

3579