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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40525408_40528187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40525408 - 40528187

Intron Length:

2780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCGCT

5'SS Class:

major

3'SS Sequence:

TTTGTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGGAA

U12 Branch Point Sequence:

AGCTGAGGAACC

Flanking Amino Acid:

QTQKADTLHLESEDLERQNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

67.6

37.6

Major BPS

44.2

-0.3

1.4

37.5

42.1

Major PPT

81.4

0.71

0.8

73.7

36.9

Minor 5ss

33.7

-1.9

3.4

44.7

44.3

Minor BPS

37.1

-1

2.4

47.51

41.6

Associated Gene:

Gene:

BATF

Ensembl Gene ID:

ENSAPLG00000024395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034652

40523602 - 40528397

4796