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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40539719_40551806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40539719 - 40551806

Intron Length:

12088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGT

5'SS Class:

major

3'SS Sequence:

CTGTCCTGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAC

U12 Branch Point Sequence:

CAAGTCACACCT

Flanking Amino Acid:

ACSIAVFGNQLGIALGFLVP

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

43.2

Major BPS

58.3

0.21

1.1

61.1

36.4

Major PPT

70.7

0.47

0.9

68.9

37.1

Minor 5ss

29.9

-2.3

3.8

46.9

48.5

Minor BPS

38.7

-0.7

1.9

50.54

43.2

Associated Gene:

Gene:

FLVCR2

Ensembl Gene ID:

ENSAPLG00000011656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047819

40538904 - 40565775

26872

ENSAPLT00000034385

40538865 - 40565775

26911

ENSAPLT00000012169

40538888 - 40565775

26888