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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40553741_40562782_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40553741 - 40562782

Intron Length:

9042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTACTGATG

5'SS Class:

weak_major

3'SS Sequence:

CTTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTGATTAAAT

Flanking Amino Acid:

ERAWWLCTFWEQTTLVVYIM

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.1

51.1

45.4

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

89.9

0.9

0.6

84.8

22.8

Minor 5ss

36.1

-1.6

3.4

44.5

44.3

Minor BPS

0.3

2.1

81.23

39.8

Associated Gene:

Gene:

FLVCR2

Ensembl Gene ID:

ENSAPLG00000011656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012169

40538888 - 40565775

26888