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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40563483_40565089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40563483 - 40565089

Intron Length:

1607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TACAGCTTGACC

Flanking Amino Acid:

SSGLLNVSAQIFGIAFTISQ

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

84.6

0.86

41.2

Major PPT

81.9

0.72

0.7

77.1

24.9

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

53.5

0.09

1.9

63.38

42.3

Associated Gene:

Gene:

FLVCR2

Ensembl Gene ID:

ENSAPLG00000011656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025978

40551382 - 40565775

14394

ENSAPLT00000012169

40538888 - 40565775

26888

ENSAPLT00000047819

40538904 - 40565775

26872

ENSAPLT00000034385

40538865 - 40565775

26911