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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40575703_40575825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40575703 - 40575825

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCCCAC

U12 Branch Point Sequence:

CCCCGCCCACCT

Flanking Amino Acid:

EKLYTASPGLVNGLQARTFG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

70.8

39.4

Major BPS

-0.3

1.2

47.5

37.7

Major PPT

82.9

0.74

0.7

76.7

25.3

Minor 5ss

32.3

-2

3.6

48.7

Minor BPS

34.5

-1

2.1

45.64

45.6

Associated Gene:

Gene:

ERG28

Ensembl Gene ID:

ENSAPLG00000011876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012350

40574183 - 40575958

1776

ENSAPLT00000034686

40574183 - 40575958

1776