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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40580238_40581088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40580238 - 40581088

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTTCATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

100

1.24

0.5

100

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

60.3

0.18

1.8

69.97

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944