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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40581196_40581776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40581196 - 40581776

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGGACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAGAT

U12 Branch Point Sequence:

TGTTTTGGGACT

Flanking Amino Acid:

TDIQKVNHFPKSYELTRKDR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

62.6

0.31

58.7

38.1

Major PPT

0.5

67.1

43.8

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

47.2

-0.1

2.1

71.61

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944