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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40600305_40608680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40600305 - 40608680

Intron Length:

8376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

GTAAATTTACCA

Flanking Amino Acid:

TFLSHRGSCFELYGFDVLID

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

0.5

0.9

61.4

35.9

Major PPT

76.8

0.6

72.6

42.4

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

47.9

-0.1

1.8

58.83

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944