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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40618422_40619328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40618422 - 40619328

Intron Length:

907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAAGC

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TGGAAGATAATT

Flanking Amino Acid:

YMLATRLFQDRDKMKGDFVT

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

63.2

41.7

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

85.3

0.79

0.6

81.2

23.8

Minor 5ss

31.8

-2.1

3.3

43.2

Minor BPS

41.2

-0.5

2.3

59.52

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944