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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40619368_40620323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40619368 - 40620323

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAATTCC

5'SS Class:

major

3'SS Sequence:

TTACGCTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TCTCTATTACGC

Flanking Amino Acid:

MKGDFVTGRSRDGLNGRLDM

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

69.5

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

78.6

0.64

0.9

69.5

41.4

Minor 5ss

41.3

-1

2.9

54.3

42.9

Minor BPS

44.1

-0.4

2.1

56.01

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944