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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40620470_40621458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40620470 - 40621458

Intron Length:

989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTACTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAACC

Flanking Amino Acid:

RARAARARSSGMSEPTKVSL

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

82.9

0.74

0.8

77.2

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

85.8

1.1

0.9

89.58

24.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944