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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40633030_40633645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40633030 - 40633645

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GATTGTGTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATTCCTAACT

Flanking Amino Acid:

SNQSENQPKVERPEVMKKIK

Intron Amino Acid Position:

757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

68.7

0.42

61.4

44.4

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

67.7

0.63

1.6

82.88

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944