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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40634560_40636103_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40634560 - 40636103

Intron Length:

1544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ATACTGCTAACT

Flanking Amino Acid:

RLSRPSSAKAGLCHRSPGGQ

Intron Amino Acid Position:

932

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

84.6

0.86

41.2

Major PPT

72.2

0.5

69.5

41.6

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

46.5

-0.1

2.3

69.35

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944