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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40686071_40693257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40686071 - 40693257

Intron Length:

7187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTACCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGCTTTTACCT

Flanking Amino Acid:

ARKAAAQRISKVASTDRQLN

Intron Amino Acid Position:

1178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

72.6

0.51

66.9

40.2

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

55.4

0.25

1.6

70.84

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944