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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40693344_40703057_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40693344 - 40703057

Intron Length:

9714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

GATTACTCAAAA

Flanking Amino Acid:

ASCEPGSNSTASACREGLTL

Intron Amino Acid Position:

1207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

93.4

0.98

0.7

92.3

26.6

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

51.7

0.05

1.8

64.87

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012413

40580155 - 40703098

122944