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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40716069_40718386_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
40716069 - 40718386

Intron Length:
2318

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTACATCCA

5'SS Class:
major

3'SS Sequence:
TGTGTTTCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATGGAT

U12 Branch Point Sequence:
TGTGTTTCCACA

Flanking Amino Acid:
LRSADTTHSTVLGLYNTLNP

Intron Amino Acid Position:
407

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66
0.38
1.1
56.4
42.6

Major BPS
54.8
0.12
1.4
55.1
42.1

Major PPT
78.2
0.64
0.9
72.5
37.8

Minor 5ss
33.3
-1.9
3.1
42.1
44.6

Minor BPS
45.4
-0.3
2
59.24
41.1

Associated Gene:

Gene:
TGFB3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

40715910 - 40729419
13510

40715910 - 40729419
13510