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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40773088_40774337_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40773088 - 40774337

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTGAGAAAT

5'SS Class:

major

3'SS Sequence:

TAACAAGAGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TTTCCTCTAACA

Flanking Amino Acid:

PLSPSTRQPISCFISVKQGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

72.3

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

48.6

-0

1.2

39.7

42.4

Minor 5ss

31.6

-2.1

42.1

39.6

Minor BPS

68.9

0.59

1.6

81.78

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012790

40772982 - 40777306

4325