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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40776008_40776363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40776008 - 40776363

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

GTGTCTGTAAGA

Flanking Amino Acid:

LMKFAAFQTLDGEVDLKLLT

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

0.57

1.2

41.2

Major PPT

77.1

0.61

0.9

72.4

37.8

Minor 5ss

34.5

-1.8

3.3

46.4

44.2

Minor BPS

48.4

-0.1

2.3

63.28

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012790

40772982 - 40777306

4325