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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40815376_40815720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40815376 - 40815720

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

CTGTCATTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTGCTGTCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

38.8

Major BPS

76.3

0.65

67.3

39.3

Major PPT

76.3

0.59

0.8

73.9

35.7

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

47.1

-0.1

2.4

74.65

43.4

Associated Gene:

Gene:

GPATCH2L

Ensembl Gene ID:

ENSAPLG00000012320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038136

40814421 - 40847342

32922

ENSAPLT00000037338

40814421 - 40845432

31012

ENSAPLT00000031424

40814421 - 40845432

31012