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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40822241_40825375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40822241 - 40825375

Intron Length:

3135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAACT

5'SS Class:

major

3'SS Sequence:

CCTGTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCATTGGTAATT

Flanking Amino Acid:

GLFTNDEGRQGDDEQSDWFY

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

78.1

36.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.9

0.74

0.8

80.3

31.7

Minor 5ss

41.7

-0.9

2.9

59.3

44.8

Minor BPS

45.5

-0.2

2.5

67.41

44.2

Associated Gene:

Gene:

GPATCH2L

Ensembl Gene ID:

ENSAPLG00000012320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031424

40814421 - 40845432

31012

ENSAPLT00000012837

40798854 - 40845432

46579

ENSAPLT00000038136

40814421 - 40847342

32922

ENSAPLT00000037338

40814421 - 40845432

31012