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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40825977_40828059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40825977 - 40828059

Intron Length:

2083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCCCT

5'SS Class:

major

3'SS Sequence:

CTTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

AACGTTTTACCT

Flanking Amino Acid:

RKGRRRLVGKETSMSTVGTE

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.8

43.6

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

83.1

0.74

0.9

80.3

37.3

Minor 5ss

46.7

-0.3

2.8

66.6

44.2

Minor BPS

48.8

-0

1.7

62.09

42.6

Associated Gene:

Gene:

GPATCH2L

Ensembl Gene ID:

ENSAPLG00000012320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038136

40814421 - 40847342

32922

ENSAPLT00000037338

40814421 - 40845432

31012

ENSAPLT00000012837

40798854 - 40845432

46579