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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40828128_40828929_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40828128 - 40828929

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGGCCC

5'SS Class:

major

3'SS Sequence:

TGCCTCCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCGAC

U12 Branch Point Sequence:

TTGCTCCCACCT

Flanking Amino Acid:

GHIVSDPRQKDFWLPSMGKR

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

56.7

39.2

Major BPS

58.8

0.22

1.3

58.1

40.4

Major PPT

78.5

0.64

0.8

69.3

36.9

Minor 5ss

33.3

-1.9

3.3

39.9

39.6

Minor BPS

44.2

-0.3

2.1

66.04

44.4

Associated Gene:

Gene:

GPATCH2L

Ensembl Gene ID:

ENSAPLG00000012320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038136

40814421 - 40847342

32922

ENSAPLT00000037338

40814421 - 40845432

31012

ENSAPLT00000012837

40798854 - 40845432

46579